Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Srrm1Q52KI8 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Gm13474-201ENSMUST00000122466 815 ntBASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Gm9013-201ENSMUST00000132939 882 ntBASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.7■□□□□ 0.74
Srrm1Q52KI8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Gm7213-201ENSMUST00000215977 950 ntBASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Srrm1Q52KI8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Gm24841-201ENSMUST00000158676 357 ntBASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Srrm1Q52KI8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Srrm1Q52KI8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Mir1668-201ENSMUST00000184114 107 ntBASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Srrm1Q52KI8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Gm24589-201ENSMUST00000116692 94 ntBASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Gm13401-201ENSMUST00000117074 291 ntBASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.65■□□□□ 0.74
Srrm1Q52KI8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Gm10566-201ENSMUST00000086739 996 ntBASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Srrm1Q52KI8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Srrm1Q52KI8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms