Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ckap2Q3V1H1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ckap2Q3V1H1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ckap2Q3V1H1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ckap2Q3V1H1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Gm24841-201ENSMUST00000158676 357 ntBASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Gm10812-201ENSMUST00000099864 546 ntBASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ckap2Q3V1H1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ckap2Q3V1H1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ckap2Q3V1H1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ckap2Q3V1H1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Gm715-201ENSMUST00000117865 831 ntBASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Ckap2Q3V1H1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ckap2Q3V1H1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.12■□□□□ 0.81
Ckap2Q3V1H1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
Ckap2Q3V1H1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms