Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cnga4Q3UW12 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.89■□□□□ 0.46
Cnga4Q3UW12 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cnga4Q3UW12 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Gm13534-201ENSMUST00000121169 513 ntBASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cnga4Q3UW12 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cnga4Q3UW12 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cnga4Q3UW12 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Haglr-201ENSMUST00000100000 2085 ntBASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Gm6139-201ENSMUST00000079261 882 ntBASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cnga4Q3UW12 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cnga4Q3UW12 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms