Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.63■□□□□ 0.41
Fam196aQ3USH1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Actl10-202ENSMUST00000226583 1501 ntBASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Gm15794-201ENSMUST00000120182 631 ntBASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.62■□□□□ 0.41
Fam196aQ3USH1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.62■□□□□ 0.41
Fam196aQ3USH1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Fam196aQ3USH1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Gm9449-201ENSMUST00000207265 1011 ntBASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.61■□□□□ 0.41
Fam196aQ3USH1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Fam196aQ3USH1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Fam196aQ3USH1 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Gm2651-201ENSMUST00000203560 838 ntBASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Fam196aQ3USH1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.58■□□□□ 0.41
Fam196aQ3USH1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Fam196aQ3USH1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Gm2213-201ENSMUST00000197485 688 ntBASIC17.58■□□□□ 0.4
Fam196aQ3USH1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms