Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Smcr8Q3UMB5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smcr8Q3UMB5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smcr8Q3UMB5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smcr8Q3UMB5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Gm7889-201ENSMUST00000185591 958 ntBASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Smcr8Q3UMB5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Tgds-204ENSMUST00000228543 1594 ntBASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Smcr8Q3UMB5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms