Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Carmil3Q3UFQ8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Gm14859-201ENSMUST00000117752 357 ntBASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Gm29791-202ENSMUST00000207888 369 ntBASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Carmil3Q3UFQ8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Fst-202ENSMUST00000223640 2612 ntBASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Carmil3Q3UFQ8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Carmil3Q3UFQ8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Gm7370-201ENSMUST00000219471 767 ntBASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Carmil3Q3UFQ8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Gm25016-201ENSMUST00000158399 131 ntBASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Carmil3Q3UFQ8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Carmil3Q3UFQ8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Carmil3Q3UFQ8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Carmil3Q3UFQ8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Carmil3Q3UFQ8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.17■□□□□ 0.98
Carmil3Q3UFQ8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Carmil3Q3UFQ8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Carmil3Q3UFQ8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Carmil3Q3UFQ8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Carmil3Q3UFQ8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 AC154471.1-201ENSMUST00000224418 436 ntBASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Carmil3Q3UFQ8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Carmil3Q3UFQ8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Carmil3Q3UFQ8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Carmil3Q3UFQ8 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Carmil3Q3UFQ8 Gm9103-201ENSMUST00000119371 405 ntBASIC21.15■□□□□ 0.98
Carmil3Q3UFQ8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Carmil3Q3UFQ8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms