Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3U1D9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3U1D9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q3U1D9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Q3U1D9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Q3U1D9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q3U1D9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Q3U1D9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Q3U1D9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3U1D9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3U1D9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3U1D9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q3U1D9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3U1D9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.27■□□□□ 0.04
Q3U1D9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Q3U1D9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.27■□□□□ 0.04
Q3U1D9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.27■□□□□ 0.04
Q3U1D9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q3U1D9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Q3U1D9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
Q3U1D9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Q3U1D9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q3U1D9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q3U1D9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q3U1D9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Q3U1D9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Q3U1D9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Q3U1D9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Q3U1D9 Gm13401-201ENSMUST00000117074 291 ntBASIC15.26■□□□□ 0.03
Q3U1D9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Q3U1D9 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q3U1D9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.25■□□□□ 0.03
Q3U1D9 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.25■□□□□ 0.03
Q3U1D9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Q3U1D9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.25■□□□□ 0.03
Q3U1D9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Q3U1D9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Q3U1D9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Q3U1D9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.24■□□□□ 0.03
Q3U1D9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.24■□□□□ 0.03
Q3U1D9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.24■□□□□ 0.03
Q3U1D9 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.24■□□□□ 0.03
Q3U1D9 Gm18959-201ENSMUST00000208954 655 ntBASIC15.24■□□□□ 0.03
Q3U1D9 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Q3U1D9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.24■□□□□ 0.03
Q3U1D9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Q3U1D9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q3U1D9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q3U1D9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.23■□□□□ 0.03
Q3U1D9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Q3U1D9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.23■□□□□ 0.03
Q3U1D9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms