Protein–RNA interactions for Protein: Q3TX51

Lrrc28, Leucine-rich repeat-containing protein 28, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc28Q3TX51 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lrrc28Q3TX51 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Gm38027-201ENSMUST00000192315 235 ntBASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.65■□□□□ 0.26
Lrrc28Q3TX51 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Gm7889-201ENSMUST00000185591 958 ntBASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lrrc28Q3TX51 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Gm13401-201ENSMUST00000117074 291 ntBASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lrrc28Q3TX51 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lrrc28Q3TX51 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrc28Q3TX51 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Lrrc28Q3TX51 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrc28Q3TX51 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrc28Q3TX51 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrc28Q3TX51 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrc28Q3TX51 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lrrc28Q3TX51 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.61■□□□□ 0.25
Lrrc28Q3TX51 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms