Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Flg-201ENSMUST00000050758 1488 ntBASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cul4aQ3TCH7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cul4aQ3TCH7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cul4aQ3TCH7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.47■□□□□ 0.55
Cul4aQ3TCH7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cul4aQ3TCH7 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Gm13401-201ENSMUST00000117074 291 ntBASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cul4aQ3TCH7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cul4aQ3TCH7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms