Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ush2AQ2QI47 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ush2AQ2QI47 Gm44872-201ENSMUST00000207864 420 ntBASIC9.46□□□□□ -0.89
Ush2AQ2QI47 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Ush2AQ2QI47 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ush2AQ2QI47 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC9.46□□□□□ -0.89
Ush2AQ2QI47 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ush2AQ2QI47 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Gm4535-201ENSMUST00000182274 558 ntBASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Gm6089-201ENSMUST00000197666 938 ntBASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Snhg20-203ENSMUST00000182811 2153 ntBASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ush2AQ2QI47 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Gm13401-201ENSMUST00000117074 291 ntBASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Gm13312-201ENSMUST00000119631 718 ntBASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Dmtn-209ENSMUST00000228295 2572 ntBASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Gm13830-205ENSMUST00000201195 1155 ntBASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Gm37352-201ENSMUST00000193908 2181 ntBASIC9.45□□□□□ -0.9
Ush2AQ2QI47 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Mir3113-201ENSMUST00000175478 76 ntBASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Gm15500-202ENSMUST00000071641 1019 ntBASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ush2AQ2QI47 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Gm27628-201ENSMUST00000184911 107 ntBASIC9.44□□□□□ -0.9
Ush2AQ2QI47 AC084391.1-201ENSMUST00000200651 141 ntBASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ush2AQ2QI47 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.43□□□□□ -0.9
Ush2AQ2QI47 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ush2AQ2QI47 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms