Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim72Q1XH17 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Gm10653-202ENSMUST00000139570 835 ntBASIC18.77■□□□□ 0.6
Trim72Q1XH17 Gm6576-201ENSMUST00000169678 883 ntBASIC18.77■□□□□ 0.6
Trim72Q1XH17 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim72Q1XH17 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Trim72Q1XH17 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim72Q1XH17 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim72Q1XH17 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim72Q1XH17 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.76■□□□□ 0.59
Trim72Q1XH17 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim72Q1XH17 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.76■□□□□ 0.59
Trim72Q1XH17 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Gm42545-201ENSMUST00000202755 922 ntBASIC18.76■□□□□ 0.59
Trim72Q1XH17 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.76■□□□□ 0.59
Trim72Q1XH17 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.76■□□□□ 0.59
Trim72Q1XH17 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim72Q1XH17 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trim72Q1XH17 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.74■□□□□ 0.59
Trim72Q1XH17 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim72Q1XH17 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Gm15378-201ENSMUST00000121894 207 ntBASIC18.73■□□□□ 0.59
Trim72Q1XH17 Gm12382-201ENSMUST00000122005 922 ntBASIC18.73■□□□□ 0.59
Trim72Q1XH17 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim72Q1XH17 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms