Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col19a1Q0VF58 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col19a1Q0VF58 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col19a1Q0VF58 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.79■□□□□ 0.6
Col19a1Q0VF58 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col19a1Q0VF58 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col19a1Q0VF58 Gm1401-201ENSMUST00000122048 772 ntBASIC18.79■□□□□ 0.6
Col19a1Q0VF58 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col19a1Q0VF58 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col19a1Q0VF58 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.79■□□□□ 0.6
Col19a1Q0VF58 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.79■□□□□ 0.6
Col19a1Q0VF58 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col19a1Q0VF58 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Col19a1Q0VF58 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col19a1Q0VF58 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Gm8000-201ENSMUST00000188378 592 ntBASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col19a1Q0VF58 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col19a1Q0VF58 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col19a1Q0VF58 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Col19a1Q0VF58 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col19a1Q0VF58 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Col19a1Q0VF58 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col19a1Q0VF58 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col19a1Q0VF58 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col19a1Q0VF58 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col19a1Q0VF58 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.76■□□□□ 0.59
Col19a1Q0VF58 Gm7063-201ENSMUST00000186840 981 ntBASIC18.76■□□□□ 0.59
Col19a1Q0VF58 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.76■□□□□ 0.59
Col19a1Q0VF58 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.76■□□□□ 0.59
Col19a1Q0VF58 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col19a1Q0VF58 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col19a1Q0VF58 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col19a1Q0VF58 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Col19a1Q0VF58 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col19a1Q0VF58 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col19a1Q0VF58 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.75■□□□□ 0.59
Col19a1Q0VF58 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Col19a1Q0VF58 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col19a1Q0VF58 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col19a1Q0VF58 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col19a1Q0VF58 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Col19a1Q0VF58 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Col19a1Q0VF58 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Gm29791-202ENSMUST00000207888 369 ntBASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.74■□□□□ 0.59
Col19a1Q0VF58 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.73■□□□□ 0.59
Col19a1Q0VF58 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms