Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ptchd3Q0EEE2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ptchd3Q0EEE2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ptchd3Q0EEE2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ptchd3Q0EEE2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Gm10849-201ENSMUST00000100397 618 ntBASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ptchd3Q0EEE2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Ptchd3Q0EEE2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms