Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Gm6089-201ENSMUST00000197666 938 ntBASIC15.82■□□□□ 0.12
Chd8Q09XV5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chd8Q09XV5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.81■□□□□ 0.12
Chd8Q09XV5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd8Q09XV5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.8■□□□□ 0.12
Chd8Q09XV5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.79■□□□□ 0.12
Chd8Q09XV5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd8Q09XV5 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.79■□□□□ 0.12
Chd8Q09XV5 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC15.79■□□□□ 0.12
Chd8Q09XV5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd8Q09XV5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd8Q09XV5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd8Q09XV5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd8Q09XV5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Chd8Q09XV5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chd8Q09XV5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.78■□□□□ 0.12
Chd8Q09XV5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.78■□□□□ 0.12
Chd8Q09XV5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd8Q09XV5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chd8Q09XV5 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Chd8Q09XV5 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd8Q09XV5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd8Q09XV5 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.77■□□□□ 0.12
Chd8Q09XV5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd8Q09XV5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd8Q09XV5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd8Q09XV5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd8Q09XV5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Chd8Q09XV5 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.77■□□□□ 0.11
Chd8Q09XV5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd8Q09XV5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.76■□□□□ 0.11
Chd8Q09XV5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Gm9731-201ENSMUST00000209480 747 ntBASIC15.76■□□□□ 0.11
Chd8Q09XV5 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.76■□□□□ 0.11
Chd8Q09XV5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.76■□□□□ 0.11
Chd8Q09XV5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd8Q09XV5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms