Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.11■□□□□ 0.01
Smn1P97801 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.11■□□□□ 0.01
Smn1P97801 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smn1P97801 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.1■□□□□ 0.01
Smn1P97801 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.1■□□□□ 0.01
Smn1P97801 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Smn1P97801 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.1■□□□□ 0.01
Smn1P97801 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smn1P97801 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smn1P97801 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Smn1P97801 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Smn1P97801 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC15.09■□□□□ 0.01
Smn1P97801 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.09■□□□□ 0.01
Smn1P97801 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smn1P97801 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Smn1P97801 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smn1P97801 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Smn1P97801 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smn1P97801 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Smn1P97801 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smn1P97801 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smn1P97801 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smn1P97801 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Smn1P97801 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smn1P97801 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.08■□□□□ 0
Smn1P97801 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.08■□□□□ 0
Smn1P97801 Nespas-201ENSMUST00000143738 1083 ntBASIC15.08■□□□□ 0
Smn1P97801 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Smn1P97801 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.08■□□□□ 0
Smn1P97801 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.08■□□□□ 0
Smn1P97801 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Smn1P97801 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smn1P97801 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Smn1P97801 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.07■□□□□ 0
Smn1P97801 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smn1P97801 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.07■□□□□ 0
Smn1P97801 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.07■□□□□ 0
Smn1P97801 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Gm6420-201ENSMUST00000193885 723 ntBASIC15.07■□□□□ 0
Smn1P97801 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.07■□□□□ 0
Smn1P97801 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.07■□□□□ 0
Smn1P97801 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smn1P97801 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Smn1P97801 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.07■□□□□ 0
Smn1P97801 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Smn1P97801 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Smn1P97801 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.06■□□□□ 0
Smn1P97801 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.06■□□□□ 0
Smn1P97801 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smn1P97801 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Smn1P97801 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.06■□□□□ 0
Smn1P97801 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms