Protein–RNA interactions for Protein: P97350

Pkp1, Plakophilin-1, mousemouse

Known RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp1P97350 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pkp1P97350 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pkp1P97350 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.58■□□□□ 0.89
Pkp1P97350 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.89
Pkp1P97350 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pkp1P97350 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.88
Pkp1P97350 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Pkp1P97350 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.58■□□□□ 0.88
Pkp1P97350 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.58■□□□□ 0.88
Pkp1P97350 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pkp1P97350 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pkp1P97350 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.58■□□□□ 0.88
Pkp1P97350 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pkp1P97350 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pkp1P97350 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pkp1P97350 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pkp1P97350 Gm10418-201ENSMUST00000100943 576 ntBASIC20.57■□□□□ 0.88
Pkp1P97350 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.57■□□□□ 0.88
Pkp1P97350 Trmt13-210ENSMUST00000198454 880 ntBASIC20.57■□□□□ 0.88
Pkp1P97350 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.57■□□□□ 0.88
Pkp1P97350 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pkp1P97350 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pkp1P97350 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pkp1P97350 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pkp1P97350 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.57■□□□□ 0.88
Pkp1P97350 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pkp1P97350 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pkp1P97350 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pkp1P97350 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.56■□□□□ 0.88
Pkp1P97350 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.56■□□□□ 0.88
Pkp1P97350 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pkp1P97350 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.56■□□□□ 0.88
Pkp1P97350 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Gm18025-201ENSMUST00000221733 862 ntBASIC20.56■□□□□ 0.88
Pkp1P97350 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.56■□□□□ 0.88
Pkp1P97350 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pkp1P97350 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.56■□□□□ 0.88
Pkp1P97350 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pkp1P97350 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.55■□□□□ 0.88
Pkp1P97350 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.55■□□□□ 0.88
Pkp1P97350 Gm6576-201ENSMUST00000169678 883 ntBASIC20.55■□□□□ 0.88
Pkp1P97350 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.55■□□□□ 0.88
Pkp1P97350 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.55■□□□□ 0.88
Pkp1P97350 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pkp1P97350 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.55■□□□□ 0.88
Pkp1P97350 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pkp1P97350 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pkp1P97350 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 Gm11643-201ENSMUST00000119578 864 ntBASIC20.54■□□□□ 0.88
Pkp1P97350 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.54■□□□□ 0.88
Pkp1P97350 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.54■□□□□ 0.88
Pkp1P97350 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pkp1P97350 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pkp1P97350 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Pkp1P97350 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Pkp1P97350 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pkp1P97350 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pkp1P97350 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pkp1P97350 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pkp1P97350 Gm10653-202ENSMUST00000139570 835 ntBASIC20.53■□□□□ 0.88
Pkp1P97350 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pkp1P97350 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pkp1P97350 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Pkp1P97350 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pkp1P97350 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pkp1P97350 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pkp1P97350 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.52■□□□□ 0.88
Pkp1P97350 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pkp1P97350 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pkp1P97350 Gm37292-201ENSMUST00000192062 758 ntBASIC20.52■□□□□ 0.88
Pkp1P97350 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.52■□□□□ 0.88
Pkp1P97350 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.52■□□□□ 0.88
Pkp1P97350 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pkp1P97350 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms