Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.43■□□□□ 0.38
Shox2P70390 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.43■□□□□ 0.38
Shox2P70390 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Shox2P70390 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shox2P70390 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Shox2P70390 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.42■□□□□ 0.38
Shox2P70390 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Shox2P70390 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.42■□□□□ 0.38
Shox2P70390 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Gm5812-201ENSMUST00000061073 957 ntBASIC17.42■□□□□ 0.38
Shox2P70390 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.42■□□□□ 0.38
Shox2P70390 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.42■□□□□ 0.38
Shox2P70390 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shox2P70390 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Shox2P70390 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Shox2P70390 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shox2P70390 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.41■□□□□ 0.38
Shox2P70390 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.41■□□□□ 0.38
Shox2P70390 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.41■□□□□ 0.38
Shox2P70390 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shox2P70390 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shox2P70390 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.4■□□□□ 0.38
Shox2P70390 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.4■□□□□ 0.38
Shox2P70390 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.4■□□□□ 0.38
Shox2P70390 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Shox2P70390 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.4■□□□□ 0.38
Shox2P70390 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Shox2P70390 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Shox2P70390 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shox2P70390 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shox2P70390 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Shox2P70390 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Shox2P70390 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shox2P70390 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.39■□□□□ 0.37
Shox2P70390 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Shox2P70390 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shox2P70390 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shox2P70390 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shox2P70390 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shox2P70390 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Shox2P70390 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shox2P70390 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shox2P70390 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Shox2P70390 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms