Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Six5P70178 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.46■□□□□ 0.23
Six5P70178 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.46■□□□□ 0.23
Six5P70178 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.46■□□□□ 0.23
Six5P70178 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.46■□□□□ 0.23
Six5P70178 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.46■□□□□ 0.23
Six5P70178 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Six5P70178 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Six5P70178 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.45■□□□□ 0.22
Six5P70178 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.45■□□□□ 0.22
Six5P70178 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.45■□□□□ 0.22
Six5P70178 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Six5P70178 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
Six5P70178 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Six5P70178 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Six5P70178 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Six5P70178 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.44■□□□□ 0.22
Six5P70178 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Gm15378-201ENSMUST00000121894 207 ntBASIC16.44■□□□□ 0.22
Six5P70178 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.44■□□□□ 0.22
Six5P70178 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Six5P70178 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Six5P70178 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.43■□□□□ 0.22
Six5P70178 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Six5P70178 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Mir8112-201ENSMUST00000184382 131 ntBASIC16.43■□□□□ 0.22
Six5P70178 Gm8520-201ENSMUST00000186517 868 ntBASIC16.43■□□□□ 0.22
Six5P70178 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.43■□□□□ 0.22
Six5P70178 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.43■□□□□ 0.22
Six5P70178 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Six5P70178 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.43■□□□□ 0.22
Six5P70178 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Six5P70178 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.42■□□□□ 0.22
Six5P70178 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Six5P70178 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Six5P70178 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Six5P70178 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Six5P70178 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Six5P70178 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Six5P70178 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six5P70178 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms