Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.58□□□□□ -0.4
Rpl39P62892 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.58□□□□□ -0.4
Rpl39P62892 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Rpl39P62892 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.58□□□□□ -0.4
Rpl39P62892 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpl39P62892 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC12.57□□□□□ -0.4
Rpl39P62892 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Rpl39P62892 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Rpl39P62892 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Rpl39P62892 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.57□□□□□ -0.4
Rpl39P62892 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Rpl39P62892 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Rpl39P62892 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Rpl39P62892 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
Rpl39P62892 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Rpl39P62892 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpl39P62892 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Rpl39P62892 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Rpl39P62892 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rpl39P62892 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rpl39P62892 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.56□□□□□ -0.4
Rpl39P62892 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.56□□□□□ -0.4
Rpl39P62892 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.56□□□□□ -0.4
Rpl39P62892 CT010467.1-202ENSMUST00000205406 714 ntBASIC12.56□□□□□ -0.4
Rpl39P62892 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Rpl39P62892 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Rpl39P62892 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Rpl39P62892 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Rpl39P62892 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.56□□□□□ -0.4
Rpl39P62892 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.55□□□□□ -0.4
Rpl39P62892 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Rpl39P62892 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Rpl39P62892 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC12.55□□□□□ -0.4
Rpl39P62892 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Rpl39P62892 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rpl39P62892 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rpl39P62892 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.54□□□□□ -0.4
Rpl39P62892 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms