Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.83□□□□□ -0.2
Ctdsp1P58466 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ctdsp1P58466 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ctdsp1P58466 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.81□□□□□ -0.2
Ctdsp1P58466 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ctdsp1P58466 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ctdsp1P58466 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdsp1P58466 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms