Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SmoP56726 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SmoP56726 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SmoP56726 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.69■□□□□ 0.42
SmoP56726 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SmoP56726 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SmoP56726 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SmoP56726 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SmoP56726 Mir8112-201ENSMUST00000184382 131 ntBASIC17.68■□□□□ 0.42
SmoP56726 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SmoP56726 Gm43799-201ENSMUST00000201845 579 ntBASIC17.68■□□□□ 0.42
SmoP56726 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SmoP56726 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.68■□□□□ 0.42
SmoP56726 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SmoP56726 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SmoP56726 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
SmoP56726 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.68■□□□□ 0.42
SmoP56726 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SmoP56726 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SmoP56726 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.68■□□□□ 0.42
SmoP56726 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SmoP56726 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SmoP56726 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SmoP56726 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SmoP56726 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SmoP56726 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SmoP56726 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SmoP56726 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.67■□□□□ 0.42
SmoP56726 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SmoP56726 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SmoP56726 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SmoP56726 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SmoP56726 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SmoP56726 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SmoP56726 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.67■□□□□ 0.42
SmoP56726 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SmoP56726 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SmoP56726 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SmoP56726 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.66■□□□□ 0.42
SmoP56726 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SmoP56726 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.66■□□□□ 0.42
SmoP56726 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.66■□□□□ 0.42
SmoP56726 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SmoP56726 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SmoP56726 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SmoP56726 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.65■□□□□ 0.42
SmoP56726 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SmoP56726 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.65■□□□□ 0.42
SmoP56726 Gm11539-201ENSMUST00000119837 557 ntBASIC17.65■□□□□ 0.42
SmoP56726 Gm13436-201ENSMUST00000120418 567 ntBASIC17.65■□□□□ 0.42
SmoP56726 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.65■□□□□ 0.42
SmoP56726 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.65■□□□□ 0.42
SmoP56726 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.65■□□□□ 0.42
SmoP56726 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SmoP56726 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SmoP56726 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SmoP56726 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SmoP56726 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SmoP56726 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SmoP56726 Gm13559-201ENSMUST00000120476 863 ntBASIC17.64■□□□□ 0.41
SmoP56726 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SmoP56726 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SmoP56726 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SmoP56726 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SmoP56726 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
SmoP56726 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms