Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rrp1P56183 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rrp1P56183 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rrp1P56183 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Rrp1P56183 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rrp1P56183 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rrp1P56183 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rrp1P56183 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrp1P56183 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrp1P56183 AV356131-201ENSMUST00000206201 750 ntBASIC19.85■□□□□ 0.77
Rrp1P56183 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.85■□□□□ 0.77
Rrp1P56183 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrp1P56183 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rrp1P56183 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrp1P56183 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrp1P56183 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrp1P56183 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rrp1P56183 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.84■□□□□ 0.77
Rrp1P56183 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Rrp1P56183 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Gm7291-201ENSMUST00000199147 382 ntBASIC19.84■□□□□ 0.77
Rrp1P56183 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.84■□□□□ 0.77
Rrp1P56183 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.84■□□□□ 0.77
Rrp1P56183 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.84■□□□□ 0.77
Rrp1P56183 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rrp1P56183 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.84■□□□□ 0.77
Rrp1P56183 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.83■□□□□ 0.77
Rrp1P56183 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rrp1P56183 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Rrp1P56183 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rrp1P56183 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rrp1P56183 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.83■□□□□ 0.77
Rrp1P56183 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.83■□□□□ 0.77
Rrp1P56183 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Rrp1P56183 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.83■□□□□ 0.77
Rrp1P56183 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.83■□□□□ 0.76
Rrp1P56183 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Rrp1P56183 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rrp1P56183 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Rrp1P56183 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rrp1P56183 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rrp1P56183 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrp1P56183 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.82■□□□□ 0.76
Rrp1P56183 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrp1P56183 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rrp1P56183 Gm27405-201ENSMUST00000184201 112 ntBASIC19.82■□□□□ 0.76
Rrp1P56183 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rrp1P56183 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrp1P56183 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rrp1P56183 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rrp1P56183 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rrp1P56183 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Rrp1P56183 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Gm2399-201ENSMUST00000104944 225 ntBASIC19.81■□□□□ 0.76
Rrp1P56183 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.81■□□□□ 0.76
Rrp1P56183 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.81■□□□□ 0.76
Rrp1P56183 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.81■□□□□ 0.76
Rrp1P56183 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rrp1P56183 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rrp1P56183 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rrp1P56183 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Rrp1P56183 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.8■□□□□ 0.76
Rrp1P56183 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Gm10418-201ENSMUST00000100943 576 ntBASIC19.8■□□□□ 0.76
Rrp1P56183 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.8■□□□□ 0.76
Rrp1P56183 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.8■□□□□ 0.76
Rrp1P56183 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Rrp1P56183 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rrp1P56183 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms