Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.6■□□□□ 0.57
NcanP55066 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.6■□□□□ 0.57
NcanP55066 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NcanP55066 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcanP55066 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcanP55066 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NcanP55066 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NcanP55066 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NcanP55066 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NcanP55066 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.59■□□□□ 0.57
NcanP55066 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.59■□□□□ 0.57
NcanP55066 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NcanP55066 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NcanP55066 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NcanP55066 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NcanP55066 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NcanP55066 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NcanP55066 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NcanP55066 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NcanP55066 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
NcanP55066 Gm10052-201ENSMUST00000168019 960 ntBASIC18.58■□□□□ 0.56
NcanP55066 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NcanP55066 Gm7729-201ENSMUST00000050143 801 ntBASIC18.58■□□□□ 0.56
NcanP55066 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NcanP55066 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.58■□□□□ 0.56
NcanP55066 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NcanP55066 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NcanP55066 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NcanP55066 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NcanP55066 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NcanP55066 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NcanP55066 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NcanP55066 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.57■□□□□ 0.56
NcanP55066 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.57■□□□□ 0.56
NcanP55066 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.57■□□□□ 0.56
NcanP55066 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.57■□□□□ 0.56
NcanP55066 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.57■□□□□ 0.56
NcanP55066 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NcanP55066 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Gm8097-201ENSMUST00000117903 829 ntBASIC18.56■□□□□ 0.56
NcanP55066 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NcanP55066 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.56■□□□□ 0.56
NcanP55066 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NcanP55066 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
NcanP55066 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
NcanP55066 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NcanP55066 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.55■□□□□ 0.56
NcanP55066 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NcanP55066 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcanP55066 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcanP55066 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcanP55066 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.54■□□□□ 0.56
NcanP55066 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NcanP55066 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcanP55066 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.54■□□□□ 0.56
NcanP55066 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.54■□□□□ 0.56
NcanP55066 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.54■□□□□ 0.56
NcanP55066 Gm2651-201ENSMUST00000203560 838 ntBASIC18.54■□□□□ 0.56
NcanP55066 Gm29791-202ENSMUST00000207888 369 ntBASIC18.54■□□□□ 0.56
NcanP55066 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.54■□□□□ 0.56
NcanP55066 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.54■□□□□ 0.56
NcanP55066 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcanP55066 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcanP55066 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcanP55066 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NcanP55066 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms