Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox3P53784 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Sox3P53784 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox3P53784 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox3P53784 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Sox3P53784 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox3P53784 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Gm23634-201ENSMUST00000175071 91 ntBASIC16.8■□□□□ 0.28
Sox3P53784 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox3P53784 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sox3P53784 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox3P53784 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.79■□□□□ 0.28
Sox3P53784 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.79■□□□□ 0.28
Sox3P53784 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
Sox3P53784 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox3P53784 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Sox3P53784 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sox3P53784 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Sox3P53784 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.78■□□□□ 0.28
Sox3P53784 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Sox3P53784 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Gm9103-201ENSMUST00000119371 405 ntBASIC16.78■□□□□ 0.28
Sox3P53784 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Gm33142-201ENSMUST00000193913 867 ntBASIC16.78■□□□□ 0.28
Sox3P53784 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sox3P53784 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Sox3P53784 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox3P53784 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.77■□□□□ 0.28
Sox3P53784 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Gm11927-201ENSMUST00000118472 759 ntBASIC16.77■□□□□ 0.28
Sox3P53784 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Gm6345-202ENSMUST00000180900 204 ntBASIC16.77■□□□□ 0.28
Sox3P53784 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.77■□□□□ 0.28
Sox3P53784 Odf3b-204ENSMUST00000227834 930 ntBASIC16.77■□□□□ 0.28
Sox3P53784 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox3P53784 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.77■□□□□ 0.27
Sox3P53784 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox3P53784 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox3P53784 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox3P53784 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox3P53784 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox3P53784 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox3P53784 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox3P53784 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox3P53784 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox3P53784 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Sox3P53784 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox3P53784 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox3P53784 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox3P53784 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox3P53784 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms