Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Atp6v1aP50516 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atp6v1aP50516 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atp6v1aP50516 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6v1aP50516 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Gm37025-201ENSMUST00000195159 829 ntBASIC21.1■□□□□ 0.97
Atp6v1aP50516 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Atp6v1aP50516 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Gm11355-201ENSMUST00000121120 306 ntBASIC21.09■□□□□ 0.97
Atp6v1aP50516 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC21.09■□□□□ 0.97
Atp6v1aP50516 AC120002.2-201ENSMUST00000220205 773 ntBASIC21.09■□□□□ 0.97
Atp6v1aP50516 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atp6v1aP50516 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atp6v1aP50516 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atp6v1aP50516 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atp6v1aP50516 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atp6v1aP50516 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atp6v1aP50516 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atp6v1aP50516 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atp6v1aP50516 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6v1aP50516 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.07■□□□□ 0.96
Atp6v1aP50516 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Gm18669-201ENSMUST00000216049 778 ntBASIC21.07■□□□□ 0.96
Atp6v1aP50516 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atp6v1aP50516 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Atp6v1aP50516 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atp6v1aP50516 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms