Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.61□□□□□ -0.07
Nkx2-1P50220 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.61□□□□□ -0.07
Nkx2-1P50220 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.6□□□□□ -0.07
Nkx2-1P50220 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nkx2-1P50220 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.6□□□□□ -0.07
Nkx2-1P50220 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkx2-1P50220 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Nkx2-1P50220 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
Nkx2-1P50220 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.58□□□□□ -0.07
Nkx2-1P50220 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-1P50220 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-1P50220 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nkx2-1P50220 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Nkx2-1P50220 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nkx2-1P50220 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nkx2-1P50220 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms