Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hnf4aP49698 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hnf4aP49698 Dio3-201ENSMUST00000097228 1449 ntBASIC17.04■□□□□ 0.32
Hnf4aP49698 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.04■□□□□ 0.32
Hnf4aP49698 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.04■□□□□ 0.32
Hnf4aP49698 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hnf4aP49698 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hnf4aP49698 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hnf4aP49698 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Hnf4aP49698 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hnf4aP49698 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.03■□□□□ 0.32
Hnf4aP49698 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.03■□□□□ 0.32
Hnf4aP49698 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Hnf4aP49698 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Hnf4aP49698 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Hnf4aP49698 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Hnf4aP49698 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hnf4aP49698 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.02■□□□□ 0.32
Hnf4aP49698 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hnf4aP49698 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hnf4aP49698 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hnf4aP49698 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hnf4aP49698 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Hnf4aP49698 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Hnf4aP49698 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.02■□□□□ 0.32
Hnf4aP49698 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Hnf4aP49698 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.02■□□□□ 0.32
Hnf4aP49698 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.02■□□□□ 0.32
Hnf4aP49698 Gm29791-202ENSMUST00000207888 369 ntBASIC17.02■□□□□ 0.32
Hnf4aP49698 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.02■□□□□ 0.32
Hnf4aP49698 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hnf4aP49698 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hnf4aP49698 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hnf4aP49698 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Hnf4aP49698 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Hnf4aP49698 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hnf4aP49698 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.01■□□□□ 0.31
Hnf4aP49698 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.01■□□□□ 0.31
Hnf4aP49698 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.01■□□□□ 0.31
Hnf4aP49698 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
Hnf4aP49698 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.01■□□□□ 0.31
Hnf4aP49698 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Hnf4aP49698 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Hnf4aP49698 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Hnf4aP49698 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Hnf4aP49698 Mir2861-201ENSMUST00000175539 82 ntBASIC17■□□□□ 0.31
Hnf4aP49698 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Hnf4aP49698 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.99■□□□□ 0.31
Hnf4aP49698 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.99■□□□□ 0.31
Hnf4aP49698 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Hnf4aP49698 Gm12896-201ENSMUST00000118430 226 ntBASIC16.99■□□□□ 0.31
Hnf4aP49698 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Hnf4aP49698 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Hnf4aP49698 Mir6349-201ENSMUST00000184059 97 ntBASIC16.99■□□□□ 0.31
Hnf4aP49698 Gm10138-203ENSMUST00000206952 366 ntBASIC16.99■□□□□ 0.31
Hnf4aP49698 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hnf4aP49698 Mtag2-201ENSMUST00000058665 714 ntBASIC16.99■□□□□ 0.31
Hnf4aP49698 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hnf4aP49698 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hnf4aP49698 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Hnf4aP49698 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Hnf4aP49698 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Hnf4aP49698 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.98■□□□□ 0.31
Hnf4aP49698 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms