Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Vps4bP46467 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Vps4bP46467 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.84■□□□□ 0.45
Vps4bP46467 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.84■□□□□ 0.45
Vps4bP46467 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps4bP46467 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps4bP46467 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps4bP46467 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vps4bP46467 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Vps4bP46467 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Vps4bP46467 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps4bP46467 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps4bP46467 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps4bP46467 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps4bP46467 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Vps4bP46467 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vps4bP46467 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.83■□□□□ 0.44
Vps4bP46467 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Vps4bP46467 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Vps4bP46467 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vps4bP46467 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.82■□□□□ 0.44
Vps4bP46467 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Mir5133-201ENSMUST00000174955 77 ntBASIC17.82■□□□□ 0.44
Vps4bP46467 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vps4bP46467 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Vps4bP46467 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vps4bP46467 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.82■□□□□ 0.44
Vps4bP46467 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vps4bP46467 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Vps4bP46467 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.81■□□□□ 0.44
Vps4bP46467 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps4bP46467 Gm26524-201ENSMUST00000192339 390 ntBASIC17.81■□□□□ 0.44
Vps4bP46467 Gm29791-202ENSMUST00000207888 369 ntBASIC17.81■□□□□ 0.44
Vps4bP46467 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Rab3c-203ENSMUST00000224180 967 ntBASIC17.81■□□□□ 0.44
Vps4bP46467 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps4bP46467 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.81■□□□□ 0.44
Vps4bP46467 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.81■□□□□ 0.44
Vps4bP46467 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Vps4bP46467 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.81■□□□□ 0.44
Vps4bP46467 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.8■□□□□ 0.44
Vps4bP46467 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Vps4bP46467 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.8■□□□□ 0.44
Vps4bP46467 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Vps4bP46467 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Vps4bP46467 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.79■□□□□ 0.44
Vps4bP46467 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Vps4bP46467 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms