Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Mir1668-201ENSMUST00000184114 107 ntBASIC16.82■□□□□ 0.28
Sox18P43680 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.82■□□□□ 0.28
Sox18P43680 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox18P43680 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Sox18P43680 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.81■□□□□ 0.28
Sox18P43680 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.81■□□□□ 0.28
Sox18P43680 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sox18P43680 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Sox18P43680 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox18P43680 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox18P43680 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.8■□□□□ 0.28
Sox18P43680 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.8■□□□□ 0.28
Sox18P43680 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox18P43680 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.8■□□□□ 0.28
Sox18P43680 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox18P43680 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sox18P43680 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.8■□□□□ 0.28
Sox18P43680 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.8■□□□□ 0.28
Sox18P43680 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.8■□□□□ 0.28
Sox18P43680 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox18P43680 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox18P43680 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sox18P43680 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox18P43680 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.79■□□□□ 0.28
Sox18P43680 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.79■□□□□ 0.28
Sox18P43680 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox18P43680 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sox18P43680 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sox18P43680 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.78■□□□□ 0.28
Sox18P43680 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sox18P43680 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Sox18P43680 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox18P43680 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox18P43680 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms