Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.69□□□□□ -0.06
Hmx3P42581 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Hmx3P42581 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Hmx3P42581 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.69□□□□□ -0.06
Hmx3P42581 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hmx3P42581 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Hmx3P42581 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Hmx3P42581 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Hmx3P42581 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmx3P42581 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Hmx3P42581 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.68□□□□□ -0.06
Hmx3P42581 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Hmx3P42581 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Hmx3P42581 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Hmx3P42581 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Hmx3P42581 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.67□□□□□ -0.06
Hmx3P42581 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Hmx3P42581 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 Gm9988-201ENSMUST00000069786 435 ntBASIC14.67□□□□□ -0.06
Hmx3P42581 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Hmx3P42581 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Hmx3P42581 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Hmx3P42581 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Hmx3P42581 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hmx3P42581 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Hmx3P42581 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Hmx3P42581 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Hmx3P42581 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmx3P42581 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC14.65□□□□□ -0.06
Hmx3P42581 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmx3P42581 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmx3P42581 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.65□□□□□ -0.06
Hmx3P42581 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.65□□□□□ -0.06
Hmx3P42581 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Hmx3P42581 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hmx3P42581 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmx3P42581 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.65□□□□□ -0.06
Hmx3P42581 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hmx3P42581 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms