Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VhlP40338 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VhlP40338 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VhlP40338 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
VhlP40338 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
VhlP40338 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
VhlP40338 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
VhlP40338 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
VhlP40338 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VhlP40338 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VhlP40338 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.45□□□□□ -0.1
VhlP40338 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VhlP40338 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.45□□□□□ -0.1
VhlP40338 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Gm13234-201ENSMUST00000120010 747 ntBASIC14.45□□□□□ -0.1
VhlP40338 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.45□□□□□ -0.1
VhlP40338 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.45□□□□□ -0.1
VhlP40338 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.45□□□□□ -0.1
VhlP40338 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.45□□□□□ -0.1
VhlP40338 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VhlP40338 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VhlP40338 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VhlP40338 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VhlP40338 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VhlP40338 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VhlP40338 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.44□□□□□ -0.1
VhlP40338 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.44□□□□□ -0.1
VhlP40338 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VhlP40338 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.44□□□□□ -0.1
VhlP40338 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VhlP40338 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
VhlP40338 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
VhlP40338 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
VhlP40338 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
VhlP40338 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VhlP40338 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.42□□□□□ -0.1
VhlP40338 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VhlP40338 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
VhlP40338 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VhlP40338 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
VhlP40338 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
VhlP40338 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.42□□□□□ -0.1
VhlP40338 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
VhlP40338 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
VhlP40338 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.42□□□□□ -0.1
VhlP40338 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VhlP40338 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VhlP40338 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VhlP40338 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms