Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
HmgclP38060 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HmgclP38060 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
HmgclP38060 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.33■□□□□ 0.37
HmgclP38060 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HmgclP38060 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Gm13168-201ENSMUST00000121771 632 ntBASIC17.33■□□□□ 0.36
HmgclP38060 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.33■□□□□ 0.36
HmgclP38060 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HmgclP38060 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
HmgclP38060 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HmgclP38060 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.32■□□□□ 0.36
HmgclP38060 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 Gm12382-201ENSMUST00000122005 922 ntBASIC17.32■□□□□ 0.36
HmgclP38060 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
HmgclP38060 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HmgclP38060 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HmgclP38060 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.31■□□□□ 0.36
HmgclP38060 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Gm8520-201ENSMUST00000186517 868 ntBASIC17.31■□□□□ 0.36
HmgclP38060 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.31■□□□□ 0.36
HmgclP38060 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.31■□□□□ 0.36
HmgclP38060 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.31■□□□□ 0.36
HmgclP38060 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HmgclP38060 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
HmgclP38060 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HmgclP38060 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.3■□□□□ 0.36
HmgclP38060 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.3■□□□□ 0.36
HmgclP38060 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HmgclP38060 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HmgclP38060 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.29■□□□□ 0.36
HmgclP38060 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HmgclP38060 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HmgclP38060 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HmgclP38060 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.28■□□□□ 0.36
HmgclP38060 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HmgclP38060 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms