Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Foxa1P35582 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.27■□□□□ 0.2
Foxa1P35582 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.27■□□□□ 0.2
Foxa1P35582 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Foxa1P35582 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Foxa1P35582 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa1P35582 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa1P35582 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa1P35582 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Foxa1P35582 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa1P35582 Gm12382-201ENSMUST00000122005 922 ntBASIC16.27■□□□□ 0.2
Foxa1P35582 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa1P35582 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa1P35582 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Foxa1P35582 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Foxa1P35582 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Foxa1P35582 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Foxa1P35582 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Foxa1P35582 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Foxa1P35582 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Foxa1P35582 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa1P35582 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.25■□□□□ 0.19
Foxa1P35582 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Foxa1P35582 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.25■□□□□ 0.19
Foxa1P35582 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.25■□□□□ 0.19
Foxa1P35582 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Foxa1P35582 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa1P35582 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.24■□□□□ 0.19
Foxa1P35582 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Foxa1P35582 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Foxa1P35582 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Foxa1P35582 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.24■□□□□ 0.19
Foxa1P35582 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Foxa1P35582 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.24■□□□□ 0.19
Foxa1P35582 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Foxa1P35582 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa1P35582 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa1P35582 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa1P35582 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa1P35582 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa1P35582 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.23■□□□□ 0.19
Foxa1P35582 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa1P35582 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.23■□□□□ 0.19
Foxa1P35582 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.23■□□□□ 0.19
Foxa1P35582 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.23■□□□□ 0.19
Foxa1P35582 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa1P35582 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa1P35582 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.23■□□□□ 0.19
Foxa1P35582 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa1P35582 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.23■□□□□ 0.19
Foxa1P35582 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.23■□□□□ 0.19
Foxa1P35582 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa1P35582 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa1P35582 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms