Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.14■□□□□ 0.01
Slc6a1P31648 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Slc6a1P31648 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.13■□□□□ 0.01
Slc6a1P31648 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.13■□□□□ 0.01
Slc6a1P31648 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.13■□□□□ 0.01
Slc6a1P31648 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Slc6a1P31648 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.13■□□□□ 0.01
Slc6a1P31648 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.13■□□□□ 0.01
Slc6a1P31648 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Slc6a1P31648 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Slc6a1P31648 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc6a1P31648 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.12■□□□□ 0.01
Slc6a1P31648 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Slc6a1P31648 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.12■□□□□ 0.01
Slc6a1P31648 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Gm13216-201ENSMUST00000117145 591 ntBASIC15.12■□□□□ 0.01
Slc6a1P31648 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Slc6a1P31648 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc6a1P31648 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Slc6a1P31648 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Slc6a1P31648 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.11■□□□□ 0.01
Slc6a1P31648 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.11■□□□□ 0.01
Slc6a1P31648 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC15.11■□□□□ 0.01
Slc6a1P31648 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.11■□□□□ 0.01
Slc6a1P31648 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
Slc6a1P31648 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Slc6a1P31648 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc6a1P31648 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a1P31648 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Slc6a1P31648 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a1P31648 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Slc6a1P31648 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Gm7860-201ENSMUST00000121190 879 ntBASIC15.1■□□□□ 0.01
Slc6a1P31648 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc6a1P31648 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.1■□□□□ 0.01
Slc6a1P31648 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc6a1P31648 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms