Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcam1P29533 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcam1P29533 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.31■□□□□ 0.84
Vcam1P29533 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcam1P29533 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vcam1P29533 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.3■□□□□ 0.84
Vcam1P29533 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vcam1P29533 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.3■□□□□ 0.84
Vcam1P29533 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.3■□□□□ 0.84
Vcam1P29533 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vcam1P29533 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Vcam1P29533 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vcam1P29533 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Vcam1P29533 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcam1P29533 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcam1P29533 Gm33142-201ENSMUST00000193913 867 ntBASIC20.29■□□□□ 0.84
Vcam1P29533 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.29■□□□□ 0.84
Vcam1P29533 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
Vcam1P29533 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Vcam1P29533 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vcam1P29533 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vcam1P29533 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vcam1P29533 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vcam1P29533 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Vcam1P29533 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vcam1P29533 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
Vcam1P29533 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.28■□□□□ 0.84
Vcam1P29533 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC20.28■□□□□ 0.84
Vcam1P29533 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.28■□□□□ 0.84
Vcam1P29533 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vcam1P29533 Mir1668-201ENSMUST00000184114 107 ntBASIC20.28■□□□□ 0.84
Vcam1P29533 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vcam1P29533 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vcam1P29533 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcam1P29533 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcam1P29533 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vcam1P29533 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Vcam1P29533 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcam1P29533 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Vcam1P29533 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcam1P29533 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.27■□□□□ 0.84
Vcam1P29533 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcam1P29533 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Vcam1P29533 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vcam1P29533 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.27■□□□□ 0.84
Vcam1P29533 Gm21559-201ENSMUST00000220638 855 ntBASIC20.27■□□□□ 0.84
Vcam1P29533 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcam1P29533 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcam1P29533 Gm8587-201ENSMUST00000076538 843 ntBASIC20.27■□□□□ 0.84
Vcam1P29533 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcam1P29533 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vcam1P29533 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vcam1P29533 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vcam1P29533 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Vcam1P29533 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.26■□□□□ 0.83
Vcam1P29533 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcam1P29533 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vcam1P29533 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcam1P29533 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcam1P29533 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vcam1P29533 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vcam1P29533 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcam1P29533 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.26■□□□□ 0.83
Vcam1P29533 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vcam1P29533 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcam1P29533 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vcam1P29533 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vcam1P29533 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
Vcam1P29533 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcam1P29533 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcam1P29533 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcam1P29533 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcam1P29533 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vcam1P29533 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcam1P29533 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcam1P29533 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vcam1P29533 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcam1P29533 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.25■□□□□ 0.83
Vcam1P29533 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcam1P29533 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC20.24■□□□□ 0.83
Vcam1P29533 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Vcam1P29533 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.24■□□□□ 0.83
Vcam1P29533 Gm7213-201ENSMUST00000215977 950 ntBASIC20.24■□□□□ 0.83
Vcam1P29533 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.24■□□□□ 0.83
Vcam1P29533 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Vcam1P29533 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vcam1P29533 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vcam1P29533 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms