Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RxrbP28704 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RxrbP28704 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RxrbP28704 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RxrbP28704 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RxrbP28704 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RxrbP28704 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RxrbP28704 Gm42778-201ENSMUST00000199644 553 ntBASIC17.68■□□□□ 0.42
RxrbP28704 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RxrbP28704 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.68■□□□□ 0.42
RxrbP28704 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RxrbP28704 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.68■□□□□ 0.42
RxrbP28704 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.68■□□□□ 0.42
RxrbP28704 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RxrbP28704 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RxrbP28704 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
RxrbP28704 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RxrbP28704 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
RxrbP28704 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
RxrbP28704 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RxrbP28704 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RxrbP28704 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RxrbP28704 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.66■□□□□ 0.42
RxrbP28704 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RxrbP28704 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.66■□□□□ 0.42
RxrbP28704 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RxrbP28704 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.66■□□□□ 0.42
RxrbP28704 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
RxrbP28704 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.66■□□□□ 0.42
RxrbP28704 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RxrbP28704 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RxrbP28704 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RxrbP28704 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RxrbP28704 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RxrbP28704 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RxrbP28704 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RxrbP28704 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RxrbP28704 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RxrbP28704 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RxrbP28704 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RxrbP28704 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.65■□□□□ 0.42
RxrbP28704 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RxrbP28704 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
RxrbP28704 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RxrbP28704 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RxrbP28704 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RxrbP28704 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RxrbP28704 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RxrbP28704 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.64■□□□□ 0.41
RxrbP28704 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RxrbP28704 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.64■□□□□ 0.41
RxrbP28704 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.64■□□□□ 0.41
RxrbP28704 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.64■□□□□ 0.41
RxrbP28704 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.64■□□□□ 0.41
RxrbP28704 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RxrbP28704 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RxrbP28704 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RxrbP28704 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RxrbP28704 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RxrbP28704 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RxrbP28704 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RxrbP28704 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.63■□□□□ 0.41
RxrbP28704 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.63■□□□□ 0.41
RxrbP28704 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms