Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col2a1P28481 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.03■□□□□ 0.8
Col2a1P28481 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.03■□□□□ 0.8
Col2a1P28481 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Col2a1P28481 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col2a1P28481 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col2a1P28481 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col2a1P28481 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Col2a1P28481 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Col2a1P28481 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col2a1P28481 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Col2a1P28481 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.02■□□□□ 0.8
Col2a1P28481 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col2a1P28481 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col2a1P28481 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col2a1P28481 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col2a1P28481 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Col2a1P28481 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Col2a1P28481 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.02■□□□□ 0.8
Col2a1P28481 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col2a1P28481 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Col2a1P28481 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Col2a1P28481 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col2a1P28481 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col2a1P28481 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col2a1P28481 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col2a1P28481 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Col2a1P28481 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.01■□□□□ 0.79
Col2a1P28481 Gm18958-201ENSMUST00000174258 762 ntBASIC20.01■□□□□ 0.79
Col2a1P28481 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.01■□□□□ 0.79
Col2a1P28481 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col2a1P28481 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col2a1P28481 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col2a1P28481 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col2a1P28481 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col2a1P28481 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20■□□□□ 0.79
Col2a1P28481 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20■□□□□ 0.79
Col2a1P28481 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 Gm25016-201ENSMUST00000158399 131 ntBASIC20■□□□□ 0.79
Col2a1P28481 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 Gm10459-201ENSMUST00000202708 1155 ntBASIC20■□□□□ 0.79
Col2a1P28481 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20■□□□□ 0.79
Col2a1P28481 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20■□□□□ 0.79
Col2a1P28481 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20■□□□□ 0.79
Col2a1P28481 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Col2a1P28481 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col2a1P28481 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.99■□□□□ 0.79
Col2a1P28481 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col2a1P28481 Gm10566-201ENSMUST00000086739 996 ntBASIC19.99■□□□□ 0.79
Col2a1P28481 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col2a1P28481 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col2a1P28481 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col2a1P28481 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col2a1P28481 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col2a1P28481 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col2a1P28481 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col2a1P28481 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Col2a1P28481 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col2a1P28481 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Col2a1P28481 Gm10819-201ENSMUST00000099988 561 ntBASIC19.99■□□□□ 0.79
Col2a1P28481 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Col2a1P28481 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col2a1P28481 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.98■□□□□ 0.79
Col2a1P28481 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col2a1P28481 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.98■□□□□ 0.79
Col2a1P28481 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col2a1P28481 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col2a1P28481 Gm7367-201ENSMUST00000057611 492 ntBASIC19.98■□□□□ 0.79
Col2a1P28481 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col2a1P28481 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col2a1P28481 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Col2a1P28481 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col2a1P28481 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col2a1P28481 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col2a1P28481 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Col2a1P28481 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col2a1P28481 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.97■□□□□ 0.79
Col2a1P28481 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Col2a1P28481 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.97■□□□□ 0.79
Col2a1P28481 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Col2a1P28481 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Col2a1P28481 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms