Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Pde6aP27664 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pde6aP27664 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Pde6aP27664 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6aP27664 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6aP27664 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Pde6aP27664 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6aP27664 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC20.39■□□□□ 0.85
Pde6aP27664 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pde6aP27664 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.39■□□□□ 0.85
Pde6aP27664 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.38■□□□□ 0.85
Pde6aP27664 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6aP27664 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6aP27664 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.38■□□□□ 0.85
Pde6aP27664 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Pde6aP27664 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.38■□□□□ 0.85
Pde6aP27664 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6aP27664 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pde6aP27664 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6aP27664 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6aP27664 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6aP27664 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6aP27664 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6aP27664 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pde6aP27664 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.37■□□□□ 0.85
Pde6aP27664 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6aP27664 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6aP27664 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6aP27664 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.37■□□□□ 0.85
Pde6aP27664 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6aP27664 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Pde6aP27664 Gm8969-201ENSMUST00000199694 526 ntBASIC20.37■□□□□ 0.85
Pde6aP27664 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.37■□□□□ 0.85
Pde6aP27664 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6aP27664 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Pde6aP27664 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6aP27664 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6aP27664 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6aP27664 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pde6aP27664 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.36■□□□□ 0.85
Pde6aP27664 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.36■□□□□ 0.85
Pde6aP27664 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Pde6aP27664 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.36■□□□□ 0.85
Pde6aP27664 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pde6aP27664 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Pde6aP27664 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pde6aP27664 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6aP27664 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.35■□□□□ 0.85
Pde6aP27664 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6aP27664 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6aP27664 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.35■□□□□ 0.85
Pde6aP27664 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.35■□□□□ 0.85
Pde6aP27664 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.35■□□□□ 0.85
Pde6aP27664 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6aP27664 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6aP27664 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pde6aP27664 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.35■□□□□ 0.85
Pde6aP27664 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6aP27664 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Pde6aP27664 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6aP27664 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pde6aP27664 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pde6aP27664 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Mir5122-201ENSMUST00000175004 89 ntBASIC20.34■□□□□ 0.85
Pde6aP27664 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.34■□□□□ 0.85
Pde6aP27664 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pde6aP27664 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pde6aP27664 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Pde6aP27664 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.33■□□□□ 0.85
Pde6aP27664 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.33■□□□□ 0.85
Pde6aP27664 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pde6aP27664 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.33■□□□□ 0.85
Pde6aP27664 Gm24841-201ENSMUST00000158676 357 ntBASIC20.33■□□□□ 0.85
Pde6aP27664 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms