Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Aldh1a1P24549 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Aldh1a1P24549 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Aldh1a1P24549 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Aldh1a1P24549 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Gm45328-201ENSMUST00000210942 917 ntBASIC18.85■□□□□ 0.61
Aldh1a1P24549 Gm18115-201ENSMUST00000221209 621 ntBASIC18.85■□□□□ 0.61
Aldh1a1P24549 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Aldh1a1P24549 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Aldh1a1P24549 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Gm24589-201ENSMUST00000116692 94 ntBASIC18.84■□□□□ 0.61
Aldh1a1P24549 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Gm44487-201ENSMUST00000205145 325 ntBASIC18.84■□□□□ 0.61
Aldh1a1P24549 Mzt1-203ENSMUST00000227948 952 ntBASIC18.84■□□□□ 0.61
Aldh1a1P24549 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Aldh1a1P24549 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Aldh1a1P24549 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Aldh1a1P24549 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Aldh1a1P24549 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Aldh1a1P24549 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Aldh1a1P24549 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.83■□□□□ 0.6
Aldh1a1P24549 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Aldh1a1P24549 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC18.82■□□□□ 0.6
Aldh1a1P24549 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Aldh1a1P24549 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Aldh1a1P24549 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.81■□□□□ 0.6
Aldh1a1P24549 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Gm43514-201ENSMUST00000198852 424 ntBASIC18.81■□□□□ 0.6
Aldh1a1P24549 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Aldh1a1P24549 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.8■□□□□ 0.6
Aldh1a1P24549 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.8■□□□□ 0.6
Aldh1a1P24549 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Aldh1a1P24549 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms