Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pde6bP23440 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pde6bP23440 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Pde6bP23440 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pde6bP23440 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.14■□□□□ 0.65
Pde6bP23440 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6bP23440 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6bP23440 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pde6bP23440 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.14■□□□□ 0.65
Pde6bP23440 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pde6bP23440 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6bP23440 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6bP23440 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6bP23440 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6bP23440 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pde6bP23440 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pde6bP23440 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Pde6bP23440 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Gm6659-201ENSMUST00000174752 547 ntBASIC19.13■□□□□ 0.65
Pde6bP23440 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.13■□□□□ 0.65
Pde6bP23440 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pde6bP23440 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.13■□□□□ 0.65
Pde6bP23440 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.13■□□□□ 0.65
Pde6bP23440 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pde6bP23440 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6bP23440 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6bP23440 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6bP23440 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.12■□□□□ 0.65
Pde6bP23440 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6bP23440 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6bP23440 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.12■□□□□ 0.65
Pde6bP23440 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6bP23440 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.12■□□□□ 0.65
Pde6bP23440 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.12■□□□□ 0.65
Pde6bP23440 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6bP23440 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pde6bP23440 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pde6bP23440 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.11■□□□□ 0.65
Pde6bP23440 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Pde6bP23440 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.11■□□□□ 0.65
Pde6bP23440 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.11■□□□□ 0.65
Pde6bP23440 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pde6bP23440 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pde6bP23440 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pde6bP23440 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pde6bP23440 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pde6bP23440 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6bP23440 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pde6bP23440 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6bP23440 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6bP23440 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6bP23440 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6bP23440 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pde6bP23440 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pde6bP23440 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pde6bP23440 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Pde6bP23440 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.09■□□□□ 0.65
Pde6bP23440 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.09■□□□□ 0.65
Pde6bP23440 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.09■□□□□ 0.65
Pde6bP23440 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pde6bP23440 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pde6bP23440 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pde6bP23440 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Pde6bP23440 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pde6bP23440 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms