Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Calm3P0DP28 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.29■□□□□ 0.84
Calm3P0DP28 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.29■□□□□ 0.84
Calm3P0DP28 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.29■□□□□ 0.84
Calm3P0DP28 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.29■□□□□ 0.84
Calm3P0DP28 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Calm3P0DP28 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Calm3P0DP28 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calm3P0DP28 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calm3P0DP28 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Calm3P0DP28 Gm715-201ENSMUST00000117865 831 ntBASIC20.28■□□□□ 0.84
Calm3P0DP28 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calm3P0DP28 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calm3P0DP28 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Calm3P0DP28 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.28■□□□□ 0.84
Calm3P0DP28 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Calm3P0DP28 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Calm3P0DP28 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Calm3P0DP28 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Calm3P0DP28 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calm3P0DP28 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calm3P0DP28 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Calm3P0DP28 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calm3P0DP28 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Calm3P0DP28 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Calm3P0DP28 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.27■□□□□ 0.84
Calm3P0DP28 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.27■□□□□ 0.84
Calm3P0DP28 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Calm3P0DP28 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Calm3P0DP28 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Calm3P0DP28 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.27■□□□□ 0.83
Calm3P0DP28 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Calm3P0DP28 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Calm3P0DP28 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Calm3P0DP28 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Calm3P0DP28 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Calm3P0DP28 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Calm3P0DP28 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Calm3P0DP28 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Calm3P0DP28 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.25■□□□□ 0.83
Calm3P0DP28 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.25■□□□□ 0.83
Calm3P0DP28 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Calm3P0DP28 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Calm3P0DP28 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.25■□□□□ 0.83
Calm3P0DP28 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Calm3P0DP28 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Calm3P0DP28 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Calm3P0DP28 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Calm3P0DP28 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Calm3P0DP28 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.24■□□□□ 0.83
Calm3P0DP28 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.24■□□□□ 0.83
Calm3P0DP28 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Calm3P0DP28 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Calm3P0DP28 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Calm3P0DP28 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Calm3P0DP28 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Calm3P0DP28 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Calm3P0DP28 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Calm3P0DP28 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Calm3P0DP28 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Calm3P0DP28 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Calm3P0DP28 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Calm3P0DP28 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Calm3P0DP28 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Calm3P0DP28 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Calm3P0DP28 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms