Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ly6c1P0CW02 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ly6c1P0CW02 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ly6c1P0CW02 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ly6c1P0CW02 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ly6c1P0CW02 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Mir6982-201ENSMUST00000184354 68 ntBASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ly6c1P0CW02 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Ly6c1P0CW02 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Rarb-207ENSMUST00000225921 2756 ntBASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Gm37055-201ENSMUST00000191866 133 ntBASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ly6c1P0CW02 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Gm12085-201ENSMUST00000119263 940 ntBASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Gm4974-201ENSMUST00000209974 875 ntBASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ly6c1P0CW02 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ly6c1P0CW02 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms