Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Gm8520-201ENSMUST00000186517 868 ntBASIC15.28■□□□□ 0.04
PtcraP0C6B2 Gm37292-201ENSMUST00000192062 758 ntBASIC15.28■□□□□ 0.04
PtcraP0C6B2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.28■□□□□ 0.04
PtcraP0C6B2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PtcraP0C6B2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PtcraP0C6B2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PtcraP0C6B2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PtcraP0C6B2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PtcraP0C6B2 Gm12382-201ENSMUST00000122005 922 ntBASIC15.27■□□□□ 0.04
PtcraP0C6B2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PtcraP0C6B2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PtcraP0C6B2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PtcraP0C6B2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PtcraP0C6B2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PtcraP0C6B2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.03
PtcraP0C6B2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PtcraP0C6B2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PtcraP0C6B2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PtcraP0C6B2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PtcraP0C6B2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PtcraP0C6B2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PtcraP0C6B2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.25■□□□□ 0.03
PtcraP0C6B2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PtcraP0C6B2 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.24■□□□□ 0.03
PtcraP0C6B2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Gm13168-201ENSMUST00000121771 632 ntBASIC15.24■□□□□ 0.03
PtcraP0C6B2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Gm10698-201ENSMUST00000182663 604 ntBASIC15.24■□□□□ 0.03
PtcraP0C6B2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Gm43183-201ENSMUST00000200632 547 ntBASIC15.24■□□□□ 0.03
PtcraP0C6B2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PtcraP0C6B2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms