Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h2P0C090 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h2P0C090 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h2P0C090 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rc3h2P0C090 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Rc3h2P0C090 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.89■□□□□ 0.45
Rc3h2P0C090 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rc3h2P0C090 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Gm24841-201ENSMUST00000158676 357 ntBASIC17.88■□□□□ 0.45
Rc3h2P0C090 Gm2274-201ENSMUST00000184539 609 ntBASIC17.88■□□□□ 0.45
Rc3h2P0C090 Gm45058-201ENSMUST00000205810 766 ntBASIC17.88■□□□□ 0.45
Rc3h2P0C090 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rc3h2P0C090 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Gm6659-201ENSMUST00000174752 547 ntBASIC17.87■□□□□ 0.45
Rc3h2P0C090 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rc3h2P0C090 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rc3h2P0C090 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.86■□□□□ 0.45
Rc3h2P0C090 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rc3h2P0C090 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h2P0C090 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h2P0C090 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h2P0C090 Gm7638-201ENSMUST00000121348 967 ntBASIC17.85■□□□□ 0.45
Rc3h2P0C090 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h2P0C090 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.85■□□□□ 0.45
Rc3h2P0C090 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h2P0C090 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.85■□□□□ 0.45
Rc3h2P0C090 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h2P0C090 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h2P0C090 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rc3h2P0C090 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rc3h2P0C090 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms