Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.69■□□□□ 0.42
Hoxa9P09631 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa9P09631 Gm21362-201ENSMUST00000194272 928 ntBASIC17.69■□□□□ 0.42
Hoxa9P09631 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa9P09631 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.69■□□□□ 0.42
Hoxa9P09631 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa9P09631 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hoxa9P09631 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.69■□□□□ 0.42
Hoxa9P09631 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.68■□□□□ 0.42
Hoxa9P09631 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.68■□□□□ 0.42
Hoxa9P09631 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.68■□□□□ 0.42
Hoxa9P09631 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hoxa9P09631 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hoxa9P09631 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hoxa9P09631 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Mir5130-201ENSMUST00000175160 84 ntBASIC17.67■□□□□ 0.42
Hoxa9P09631 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Hoxa9P09631 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Hoxa9P09631 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hoxa9P09631 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hoxa9P09631 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.67■□□□□ 0.42
Hoxa9P09631 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hoxa9P09631 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa9P09631 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.66■□□□□ 0.42
Hoxa9P09631 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Hoxa9P09631 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa9P09631 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa9P09631 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Hoxa9P09631 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa9P09631 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa9P09631 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa9P09631 Gm23634-201ENSMUST00000175071 91 ntBASIC17.66■□□□□ 0.42
Hoxa9P09631 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.66■□□□□ 0.42
Hoxa9P09631 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa9P09631 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.66■□□□□ 0.42
Hoxa9P09631 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hoxa9P09631 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa9P09631 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hoxa9P09631 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.66■□□□□ 0.42
Hoxa9P09631 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Hoxa9P09631 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hoxa9P09631 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxa9P09631 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hoxa9P09631 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa9P09631 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.64■□□□□ 0.41
Hoxa9P09631 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Hoxa9P09631 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa9P09631 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hoxa9P09631 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa9P09631 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa9P09631 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hoxa9P09631 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa9P09631 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa9P09631 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.63■□□□□ 0.41
Hoxa9P09631 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa9P09631 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.63■□□□□ 0.41
Hoxa9P09631 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.63■□□□□ 0.41
Hoxa9P09631 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa9P09631 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa9P09631 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa9P09631 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa9P09631 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.63■□□□□ 0.41
Hoxa9P09631 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa9P09631 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hoxa9P09631 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hoxa9P09631 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms