Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.3■□□□□ 0.36
Hoxa4P06798 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.3■□□□□ 0.36
Hoxa4P06798 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hoxa4P06798 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.3■□□□□ 0.36
Hoxa4P06798 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Hoxa4P06798 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Hoxa4P06798 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Hoxa4P06798 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.29■□□□□ 0.36
Hoxa4P06798 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa4P06798 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Hoxa4P06798 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa4P06798 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.29■□□□□ 0.36
Hoxa4P06798 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa4P06798 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa4P06798 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa4P06798 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa4P06798 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.29■□□□□ 0.36
Hoxa4P06798 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa4P06798 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Hoxa4P06798 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.28■□□□□ 0.36
Hoxa4P06798 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxa4P06798 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxa4P06798 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.28■□□□□ 0.36
Hoxa4P06798 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.28■□□□□ 0.36
Hoxa4P06798 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.28■□□□□ 0.36
Hoxa4P06798 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.28■□□□□ 0.36
Hoxa4P06798 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Hoxa4P06798 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.28■□□□□ 0.36
Hoxa4P06798 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hoxa4P06798 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa4P06798 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa4P06798 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa4P06798 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa4P06798 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Hoxa4P06798 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa4P06798 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxa4P06798 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Hoxa4P06798 Gm12085-201ENSMUST00000119263 940 ntBASIC17.27■□□□□ 0.36
Hoxa4P06798 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.27■□□□□ 0.36
Hoxa4P06798 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hoxa4P06798 Gm37025-201ENSMUST00000195159 829 ntBASIC17.27■□□□□ 0.36
Hoxa4P06798 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa4P06798 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa4P06798 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa4P06798 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxa4P06798 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa4P06798 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Hoxa4P06798 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa4P06798 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Hoxa4P06798 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.27■□□□□ 0.35
Hoxa4P06798 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa4P06798 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxa4P06798 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.27■□□□□ 0.35
Hoxa4P06798 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hoxa4P06798 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hoxa4P06798 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.26■□□□□ 0.35
Hoxa4P06798 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Hoxa4P06798 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.26■□□□□ 0.35
Hoxa4P06798 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.26■□□□□ 0.35
Hoxa4P06798 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.26■□□□□ 0.35
Hoxa4P06798 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxa4P06798 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hoxa4P06798 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa4P06798 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hoxa4P06798 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hoxa4P06798 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxa4P06798 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.25■□□□□ 0.35
Hoxa4P06798 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.25■□□□□ 0.35
Hoxa4P06798 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.25■□□□□ 0.35
Hoxa4P06798 Gm5417-201ENSMUST00000079706 384 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms