Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PdgfrbP05622 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PdgfrbP05622 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PdgfrbP05622 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
PdgfrbP05622 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.77■□□□□ 0.43
PdgfrbP05622 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PdgfrbP05622 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PdgfrbP05622 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PdgfrbP05622 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PdgfrbP05622 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.76■□□□□ 0.43
PdgfrbP05622 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PdgfrbP05622 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Gm13401-201ENSMUST00000117074 291 ntBASIC17.76■□□□□ 0.43
PdgfrbP05622 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.76■□□□□ 0.43
PdgfrbP05622 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.76■□□□□ 0.43
PdgfrbP05622 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.76■□□□□ 0.43
PdgfrbP05622 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PdgfrbP05622 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PdgfrbP05622 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfrbP05622 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfrbP05622 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfrbP05622 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfrbP05622 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfrbP05622 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.75■□□□□ 0.43
PdgfrbP05622 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfrbP05622 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfrbP05622 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfrbP05622 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PdgfrbP05622 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PdgfrbP05622 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PdgfrbP05622 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.74■□□□□ 0.43
PdgfrbP05622 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Gm10418-201ENSMUST00000100943 576 ntBASIC17.74■□□□□ 0.43
PdgfrbP05622 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.74■□□□□ 0.43
PdgfrbP05622 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Gm42545-201ENSMUST00000202755 922 ntBASIC17.74■□□□□ 0.43
PdgfrbP05622 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PdgfrbP05622 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.74■□□□□ 0.43
PdgfrbP05622 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PdgfrbP05622 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.73■□□□□ 0.43
PdgfrbP05622 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Gm18666-201ENSMUST00000190039 958 ntBASIC17.73■□□□□ 0.43
PdgfrbP05622 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.73■□□□□ 0.43
PdgfrbP05622 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.73■□□□□ 0.43
PdgfrbP05622 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PdgfrbP05622 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.72■□□□□ 0.43
PdgfrbP05622 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PdgfrbP05622 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.72■□□□□ 0.43
PdgfrbP05622 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PdgfrbP05622 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms