Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CopeO89079 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.18■□□□□ 0.5
CopeO89079 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CopeO89079 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CopeO89079 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CopeO89079 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CopeO89079 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CopeO89079 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CopeO89079 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CopeO89079 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.17■□□□□ 0.5
CopeO89079 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CopeO89079 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CopeO89079 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CopeO89079 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CopeO89079 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.17■□□□□ 0.5
CopeO89079 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CopeO89079 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CopeO89079 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CopeO89079 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.16■□□□□ 0.5
CopeO89079 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CopeO89079 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CopeO89079 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CopeO89079 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CopeO89079 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CopeO89079 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CopeO89079 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Gm7514-201ENSMUST00000209475 934 ntBASIC18.15■□□□□ 0.5
CopeO89079 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CopeO89079 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.15■□□□□ 0.5
CopeO89079 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CopeO89079 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.14■□□□□ 0.5
CopeO89079 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.14■□□□□ 0.49
CopeO89079 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CopeO89079 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.14■□□□□ 0.49
CopeO89079 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.14■□□□□ 0.49
CopeO89079 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.14■□□□□ 0.49
CopeO89079 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.14■□□□□ 0.49
CopeO89079 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Gm10493-201ENSMUST00000097270 612 ntBASIC18.14■□□□□ 0.49
CopeO89079 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.14■□□□□ 0.49
CopeO89079 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CopeO89079 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CopeO89079 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.14■□□□□ 0.49
CopeO89079 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.14■□□□□ 0.49
CopeO89079 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CopeO89079 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CopeO89079 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CopeO89079 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CopeO89079 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CopeO89079 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CopeO89079 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.13■□□□□ 0.49
CopeO89079 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms