Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Gm10418-201ENSMUST00000100943 576 ntBASIC19.2■□□□□ 0.66
Slc6a20bO88575 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Slc6a20bO88575 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Gm37722-201ENSMUST00000193757 208 ntBASIC19.2■□□□□ 0.66
Slc6a20bO88575 Gm5864-201ENSMUST00000202263 970 ntBASIC19.2■□□□□ 0.66
Slc6a20bO88575 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Slc6a20bO88575 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc6a20bO88575 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.19■□□□□ 0.66
Slc6a20bO88575 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.19■□□□□ 0.66
Slc6a20bO88575 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc6a20bO88575 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20bO88575 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc6a20bO88575 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Actl10-202ENSMUST00000226583 1501 ntBASIC19.16■□□□□ 0.66
Slc6a20bO88575 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20bO88575 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.16■□□□□ 0.66
Slc6a20bO88575 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Slc6a20bO88575 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.15■□□□□ 0.66
Slc6a20bO88575 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20bO88575 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Slc6a20bO88575 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.14■□□□□ 0.66
Slc6a20bO88575 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20bO88575 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20bO88575 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20bO88575 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20bO88575 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Slc6a20bO88575 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20bO88575 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Slc6a20bO88575 Gm27459-201ENSMUST00000184860 107 ntBASIC19.14■□□□□ 0.65
Slc6a20bO88575 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.14■□□□□ 0.65
Slc6a20bO88575 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.14■□□□□ 0.65
Slc6a20bO88575 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Slc6a20bO88575 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms