Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Il3ra-202ENSMUST00000223589 738 ntBASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tnfrsf17O88472 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tnfrsf17O88472 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Gm7063-201ENSMUST00000186840 981 ntBASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.3■□□□□ 0.2
Tnfrsf17O88472 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tnfrsf17O88472 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Gm12895-201ENSMUST00000122214 226 ntBASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Gm10052-201ENSMUST00000168019 960 ntBASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Gm9731-201ENSMUST00000209480 747 ntBASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Gm7729-201ENSMUST00000050143 801 ntBASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tnfrsf17O88472 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tnfrsf17O88472 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Tnfrsf17O88472 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf17O88472 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Tnfrsf17O88472 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.27■□□□□ 0.2
Tnfrsf17O88472 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf17O88472 Gm10418-201ENSMUST00000100943 576 ntBASIC16.27■□□□□ 0.2
Tnfrsf17O88472 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Tnfrsf17O88472 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf17O88472 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.27■□□□□ 0.2
Tnfrsf17O88472 Gm15794-201ENSMUST00000120182 631 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms